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Intron Name: Anas_platyrhynchos_platyrhynchos_2_83426184_83429607_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83426184 - 83429607

Intron Length:

3424

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGT|GTAAGTAAA

5'SS Class:

major

3'SS Sequence:

ATTTGTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAA

U12 Branch Point Sequence:

TGTTATTTAAGT

Flanking Amino Acid:

DLIYGIFTTNVNSIAASAVC

Intron Amino Acid Position:

313

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.3

0.62

1.1

76.2

34.7

Major BPS

79.5

0.73

0.9

36.9

Major PPT

86.6

0.82

0.8

81.1

35.9

Minor 5ss

-1.5

2.8

43.1

43.9

Minor BPS

63.6

0.5

1.8

81.57

39.9

Associated Gene:

Gene:

SEMA5A

Ensembl Gene ID:

ENSAPLG00000006152

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006403

83302222 - 83570415

268194

ENSAPLT00000028203

83225112 - 83548305

323194

ENSAPLT00000023474

83302222 - 83549838

247617