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Intron Name: Anas_platyrhynchos_platyrhynchos_2_834356_835493_R


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
834356 - 835493

Intron Length:
1138

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTTGGTGTC

5'SS Class:
major

3'SS Sequence:
TGTGTCTTTCTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTTAAT

U12 Branch Point Sequence:
AAAACTTTAATT

Flanking Amino Acid:
MKVLGRPKPEDMNSKMIDFE

Intron Amino Acid Position:
101

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
74.7
0.58
1.2
72.1
39.4

Major BPS
87.2
0.92
0.9
87.6
25.6

Major PPT
78.1
0.63
0.9
70
41.4

Minor 5ss
32.2
-2
3.4
43.7
44.1

Minor BPS
66.5
0.6
1.2
73.41
37.2

Associated Gene:

Gene:
MYL3

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

830651 - 863589
32939