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Intron Name: Anas_platyrhynchos_platyrhynchos_2_83482697_83519050_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83482697 - 83519050

Intron Length:

36354

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

CGTTTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

ATGATTGTAATC

Flanking Amino Acid:

NGPDCPGCSVEYQPCNTNAC

Intron Amino Acid Position:

694

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.97

0.8

88.8

Major BPS

84.4

0.85

1.1

34.5

Major PPT

0.83

0.7

84.6

30.3

Minor 5ss

37.5

-1.4

2.8

48.3

41.8

Minor BPS

46.6

-0.2

1.9

56.17

37.1

Associated Gene:

Gene:

SEMA5A

Ensembl Gene ID:

ENSAPLG00000006152

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006403

83302222 - 83570415

268194

ENSAPLT00000028203

83225112 - 83548305

323194

ENSAPLT00000023474

83302222 - 83549838

247617