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Intron Name: Anas_platyrhynchos_platyrhynchos_2_83519277_83527126_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83519277 - 83527126

Intron Length:

7850

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTATTTTATTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTCAACC

Flanking Amino Acid:

SDGTSGCSTDGLSGDFLRAG

Intron Amino Acid Position:

769

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

75.9

35.2

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

81.2

0.7

0.9

82.4

33.8

Minor 5ss

38.8

-1.3

2.9

45.4

43.9

Minor BPS

72.3

0.68

1.4

31.8

Associated Gene:

Gene:

SEMA5A

Ensembl Gene ID:

ENSAPLG00000006152

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028203

83225112 - 83548305

323194

ENSAPLT00000023474

83302222 - 83549838

247617

ENSAPLT00000006403

83302222 - 83570415

268194