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Intron Name: Anas_platyrhynchos_platyrhynchos_2_83536707_83540522_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83536707 - 83540522

Intron Length:

3816

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGCAA

5'SS Class:

major

3'SS Sequence:

CTGCCCACTATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTATAT

U12 Branch Point Sequence:

GTGTGTATATCT

Flanking Amino Acid:

EALCNTQQCPDSWSEWSEWS

Intron Amino Acid Position:

899

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.7

0.46

1.1

59.3

41.3

Major BPS

64.1

0.35

1.2

45.5

Major PPT

65.8

0.36

0.9

58.6

31.6

Minor 5ss

28.3

-2.5

3.5

46.9

Minor BPS

44.6

-0.3

2.2

65.18

45.4

Associated Gene:

Gene:

SEMA5A

Ensembl Gene ID:

ENSAPLG00000006152

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006403

83302222 - 83570415

268194

ENSAPLT00000028203

83225112 - 83548305

323194

ENSAPLT00000023474

83302222 - 83549838

247617