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Intron Name: Anas_platyrhynchos_platyrhynchos_2_83544423_83546595_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83544423 - 83546595

Intron Length:

2173

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

CTCCACTATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTTAA

U12 Branch Point Sequence:

GCTTCCTTAAGA

Flanking Amino Acid:

SSSIEEKRCGEFNMFHMIAV

Intron Amino Acid Position:

967

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

79.1

37.5

Major BPS

69.7

0.49

59.9

38.5

Major PPT

71.5

0.49

0.9

65.3

34.8

Minor 5ss

0.04

2.8

74.4

41.8

Minor BPS

71.9

0.68

1.6

75.93

41.5

Associated Gene:

Gene:

SEMA5A

Ensembl Gene ID:

ENSAPLG00000006152

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023474

83302222 - 83549838

247617

ENSAPLT00000006403

83302222 - 83570415

268194

ENSAPLT00000028203

83225112 - 83548305

323194