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Intron Name: Anas_platyrhynchos_platyrhynchos_2_83546808_83548185_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83546808 - 83548185

Intron Length:

1378

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTTCCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCTT

U12 Branch Point Sequence:

TTTTCTTTTCCC

Flanking Amino Acid:

DKYDSVEAIKAFNKNNLILE

Intron Amino Acid Position:

1038

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.8

35.2

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

84.2

0.77

0.7

77.2

31.5

Minor 5ss

28.4

-2.5

2.8

34.6

41.3

Minor BPS

46.8

-0.2

3.6

78.32

37.8

Associated Gene:

Gene:

SEMA5A

Ensembl Gene ID:

ENSAPLG00000006152

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023474

83302222 - 83549838

247617

ENSAPLT00000028203

83225112 - 83548305

323194