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Intron Name: Anas_platyrhynchos_platyrhynchos_2_83546808_83570403_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83546808 - 83570403

Intron Length:

23596

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGAAGC

5'SS Class:

strong_major

3'SS Sequence:

TTGGTTATTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATTAT

U12 Branch Point Sequence:

TTGACAACAAAA

Flanking Amino Acid:

DKYDSVEAIKEMK*

Intron Amino Acid Position:

1038

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.8

35.2

Major BPS

68.1

0.45

58.1

38.5

Major PPT

75.6

0.58

0.9

70.7

39.8

Minor 5ss

28.4

-2.5

2.8

34.6

41.3

Minor BPS

42.1

-0.6

56.61

41.5

Associated Gene:

Gene:

SEMA5A

Ensembl Gene ID:

ENSAPLG00000006152

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006403

83302222 - 83570415

268194