Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_83858850_83860256_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83858850 - 83860256

Intron Length:

1407

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGACA

5'SS Class:

strong_major

3'SS Sequence:

TGCTTCTTTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTATTTATTT

Flanking Amino Acid:

KLQARFYSASSSNLYQPGKL

Intron Amino Acid Position:

460

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

74.2

35.8

Major BPS

96.5

1.15

0.6

34.2

Major PPT

85.4

0.8

79.6

32.5

Minor 5ss

32.6

-2

3.1

41.2

44.8

Minor BPS

64.4

0.53

1.7

84.57

36.4

Associated Gene:

Gene:

MTRR

Ensembl Gene ID:

ENSAPLG00000008057

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027906

83852349 - 83874467

22119

ENSAPLT00000008404

83852349 - 83890003

37655