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Intron Name: Anas_platyrhynchos_platyrhynchos_2_83860300_83861495_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

83860300 - 83861495

Intron Length:

1196

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TTTAATTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTAAT

U12 Branch Point Sequence:

TTTTCTTTAATT

Flanking Amino Acid:

SCKPSLNLLIEHLPKLQARF

Intron Amino Acid Position:

446

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.89

0.9

77.6

30.7

Major BPS

87.2

0.92

0.9

87.6

25.6

Major PPT

87.3

0.84

0.8

84.9

35.2

Minor 5ss

33.1

-1.9

3.2

40.3

40.2

Minor BPS

90.6

1.35

0.7

99.65

21.1

Associated Gene:

Gene:

MTRR

Ensembl Gene ID:

ENSAPLG00000008057

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008404

83852349 - 83890003

37655

ENSAPLT00000027906

83852349 - 83874467

22119