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Intron Name: Anas_platyrhynchos_platyrhynchos_2_83872356_83874050_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

83872356 - 83874050

Intron Length:

1695

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGAGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCTCTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTAAAT

U12 Branch Point Sequence:

TTTTTTTTTCCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

31.2

Major BPS

58.4

0.21

1.2

38.7

Major PPT

0.9

0.6

85.3

Minor 5ss

35.8

-1.6

3.3

46.4

48.9

Minor BPS

45.5

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

MTRR

Ensembl Gene ID:

ENSAPLG00000008057

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027906

83852349 - 83874467

22119

ENSAPLT00000008404

83852349 - 83890003

37655