About Basic Search Advanced Search Downloads

© 2019-2022 Kanadia Lab,
PNB, Uconn

Construction by: Audrey Weber

Contact Us

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_83902911_83906583_R

Intron Information:

Intron Rank:
23
Intron Class:
major
Intron Phase:
1
Intron Coordinates:
83902911 - 83906583
Intron Length:
3673

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
TAG|GTATGTATT
5'SS Class:
strong_major
3'SS Sequence:
TGATGTTTTTCAG|G
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
TCTTAAT
U12 Branch Point Sequence:
ATCTTCTTAATA
Flanking Amino Acid:
HSFNDFKLRVGINHGPVIAG
Intron Amino Acid Position:
1013

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
91.9
0.99
0.8
92.6
23.2
Major BPS
87
0.92
0.9
86.2
29.1
Major PPT
80.2
0.68
0.9
77.1
41.8
Minor 5ss
47.8
-0.2
2.5
68.3
42.6
Minor BPS
76.2
0.82
1.1
76.94
34.3

Associated Gene:

Gene:
ADCY2
Ensembl Gene ID:
ENSAPLG00000008644
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000017689
83901280 - 84105105
203826
ENSAPLT00000044080
83901280 - 84105105
203826
ENSAPLT00000009050
83901280 - 84105105
203826
ENSAPLT00000042554
83901280 - 84105105
203826
ENSAPLT00000040624
83901280 - 84105105
203826
ENSAPLT00000027227
83901280 - 84105105
203826