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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_83906699_83908756_R

Intron Information:

Intron Rank:
22
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
83906699 - 83908756
Intron Length:
2058

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTATAAAAA
5'SS Class:
major
3'SS Sequence:
TTTGGCAATTCAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
ATTTTAT
U12 Branch Point Sequence:
ATGATTTTATTC
Flanking Amino Acid:
SATPNQEQCQEPERQYMHIG
Intron Amino Acid Position:
975

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
75.4
0.6
1
72
32.5
Major BPS
87.7
0.94
0.8
77.7
36.7
Major PPT
71.4
0.48
1
67.6
42.7
Minor 5ss
38.2
-1.3
2.9
48.3
47.4
Minor BPS
48.9
-0.1
1.5
56.33
36.9

Associated Gene:

Gene:
ADCY2
Ensembl Gene ID:
ENSAPLG00000008644
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000027227
83901280 - 84105105
203826
ENSAPLT00000017689
83901280 - 84105105
203826
ENSAPLT00000044080
83901280 - 84105105
203826
ENSAPLT00000009050
83901280 - 84105105
203826
ENSAPLT00000042554
83901280 - 84105105
203826
ENSAPLT00000040624
83901280 - 84105105
203826