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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_83916264_83923583_R

Intron Information:

Intron Rank:
19
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
83916264 - 83923583
Intron Length:
7320

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTAAGATGC
5'SS Class:
strong_major
3'SS Sequence:
CCTCTTGTAACAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TCTTTAC
U12 Branch Point Sequence:
GTTTCTTTACCT
Flanking Amino Acid:
FVTLLVLGRQNEYYCRLDFL
Intron Amino Acid Position:
837

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
90.1
0.95
0.8
75.9
34.8
Major BPS
74
0.6
1
65.6
41.1
Major PPT
72.8
0.51
1
68.3
36.2
Minor 5ss
38.3
-1.3
3.1
50.9
45.7
Minor BPS
74
0.83
1.6
88.47
36.7

Associated Gene:

Gene:
ADCY2
Ensembl Gene ID:
ENSAPLG00000008644
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000017689
83901280 - 84105105
203826
ENSAPLT00000009050
83901280 - 84105105
203826
ENSAPLT00000044080
83901280 - 84105105
203826
ENSAPLT00000040624
83901280 - 84105105
203826