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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_83957665_83962708_R

Intron Information:

Intron Rank:
12
Intron Class:
major
Intron Phase:
2
Intron Coordinates:
83957665 - 83962708
Intron Length:
5044

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAA|GTATGTTTG
5'SS Class:
major
3'SS Sequence:
TTTCCTTTTCTAG|G
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
TTATGAT
U12 Branch Point Sequence:
TGTTTTATATTT
Flanking Amino Acid:
IQAIDGINAQKQWLKSEDIQ
Intron Amino Acid Position:
576

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
78.4
0.67
1
74.2
37
Major BPS
84.6
0.86
1
74
41.2
Major PPT
87.3
0.84
0.6
81
31
Minor 5ss
55.7
0.19
2.3
66.6
38.8
Minor BPS
49.9
0.07
1.8
72.8
38.7

Associated Gene:

Gene:
ADCY2
Ensembl Gene ID:
ENSAPLG00000008644
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000027227
83901280 - 84105105
203826
ENSAPLT00000017689
83901280 - 84105105
203826
ENSAPLT00000044080
83901280 - 84105105
203826
ENSAPLT00000009050
83901280 - 84105105
203826
ENSAPLT00000042554
83901280 - 84105105
203826
ENSAPLT00000040624
83901280 - 84105105
203826