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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_83967409_83967779_R

Intron Information:

Intron Rank:
8
Intron Class:
major
Intron Phase:
2
Intron Coordinates:
83967409 - 83967779
Intron Length:
371

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AGG|GTAAGAGGC
5'SS Class:
major
3'SS Sequence:
AATATAATTTCAG|C
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTTAAA
U12 Branch Point Sequence:
ATTCTTTTAAAA
Flanking Amino Acid:
ANHMEAGGVPGRVHITSVTL
Intron Amino Acid Position:
431

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
79.7
0.7
1
64.2
40.9
Major BPS
90.4
1
0.7
90.2
19.3
Major PPT
69.8
0.45
1
64.4
45
Minor 5ss
30.3
-2.3
3.3
33.5
42
Minor BPS
64.9
0.46
1.3
72.15
33

Associated Gene:

Gene:
ADCY2
Ensembl Gene ID:
ENSAPLG00000008644
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000017689
83901280 - 84105105
203826
ENSAPLT00000044080
83901280 - 84105105
203826
ENSAPLT00000009050
83901280 - 84105105
203826
ENSAPLT00000042554
83901280 - 84105105
203826
ENSAPLT00000040624
83901280 - 84105105
203826
ENSAPLT00000027227
83901280 - 84105105
203826