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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_83975157_83976152_R

Intron Information:

Intron Rank:
5
Intron Class:
major
Intron Phase:
2
Intron Coordinates:
83975157 - 83976152
Intron Length:
996

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTATTGTAC
5'SS Class:
major
3'SS Sequence:
ATTTCTGTTGTAG|C
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TGTTCAT
U12 Branch Point Sequence:
TTTCTGTTCATT
Flanking Amino Acid:
NLYVKRHTNVSILYADIVGF
Intron Amino Acid Position:
298

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
71.9
0.52
1.1
64.6
35.9
Major BPS
84.8
0.86
1
85.7
34.9
Major PPT
78.8
0.65
0.9
73.9
36.1
Minor 5ss
43.2
-0.7
3.1
58.4
46.5
Minor BPS
48.3
-0
2.4
76.4
40.9

Associated Gene:

Gene:
ADCY2
Ensembl Gene ID:
ENSAPLG00000008644
Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000017689
83901280 - 84105105
203826
ENSAPLT00000044080
83901280 - 84105105
203826
ENSAPLT00000009050
83901280 - 84105105
203826
ENSAPLT00000042554
83901280 - 84105105
203826
ENSAPLT00000040624
83901280 - 84105105
203826
ENSAPLT00000027227
83901280 - 84105105
203826