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Intron Name: Anas_platyrhynchos_platyrhynchos_2_84428751_84428825_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

84428751 - 84428825

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

TCTCGCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGCTCAG

U12 Branch Point Sequence:

CGGGGCTCAGCC

Flanking Amino Acid:

PATLRITGYKSHAREIRHCL

Intron Amino Acid Position:

116

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.2

37.4

Major BPS

45.3

-0.3

1.7

51.1

46.3

Major PPT

72.4

0.5

0.8

65.6

30.3

Minor 5ss

23.1

-3.1

3.2

43.5

Minor BPS

-0.8

2.1

42.79

44.4

Associated Gene:

Gene:

NSUN2

Ensembl Gene ID:

ENSAPLG00000011518

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012079

84428404 - 84446867

18464