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Intron Name: Anas_platyrhynchos_platyrhynchos_2_84504627_84505848_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

84504627 - 84505848

Intron Length:

1222

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGAGGCCT

5'SS Class:

major

3'SS Sequence:

TGTCAGAAAACAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATCTAAA

U12 Branch Point Sequence:

TGTTCTTCAAAA

Flanking Amino Acid:

PSSQAGLNQKLNKKNQSSIC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.5

0.32

1.1

56.4

42.2

Major BPS

76.5

0.66

0.8

75.9

24.9

Major PPT

55.2

0.12

1.1

48.4

42.7

Minor 5ss

30.9

-2.2

3.4

49.8

Minor BPS

63.3

0.42

1.6

73.98

37.3

Associated Gene:

Gene:

MED10

Ensembl Gene ID:

ENSAPLG00000018076

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028166

84504505 - 84507781

3277