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Intron Name: Anas_platyrhynchos_platyrhynchos_2_84618031_84618245_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

84618031 - 84618245

Intron Length:

215

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGGATT

5'SS Class:

major

3'SS Sequence:

AATGTAATTCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.5

0.69

78.6

37.3

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

63.8

0.31

53.2

45.2

Minor 5ss

31.4

-2.1

3.6

47.3

48.3

Minor BPS

0.74

1.1

78.3

32.8

Associated Gene:

Gene:

UPP1

Ensembl Gene ID:

ENSAPLG00000011706

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012201

84617459 - 84627631

10173