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Intron Name: Anas_platyrhynchos_platyrhynchos_2_84618311_84620964_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

84618311 - 84620964

Intron Length:

2654

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGATTC

5'SS Class:

strong_major

3'SS Sequence:

GCTGTCCTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCACAA

U12 Branch Point Sequence:

CATTCGCTAAGT

Flanking Amino Acid:

EKKKEDEQSSKGNAIHLCNP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

0.9

78.8

29.4

Major BPS

68.5

0.46

75.3

29.8

Major PPT

66.8

0.38

40.3

Minor 5ss

44.2

-0.6

3.1

60.1

38.6

Minor BPS

45.8

-0.2

2.5

69.55

46.9

Associated Gene:

Gene:

UPP1

Ensembl Gene ID:

ENSAPLG00000011706

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029290

84616760 - 84626854

10095

ENSAPLT00000012201

84617459 - 84627631

10173