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Intron Name: Anas_platyrhynchos_platyrhynchos_2_84623627_84625096_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

84623627 - 84625096

Intron Length:

1470

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

AATGGCTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAA

U12 Branch Point Sequence:

ACGTCCTCAATC

Flanking Amino Acid:

NTMCTLDFYEGQGRLDGAIC

Intron Amino Acid Position:

219

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

73.3

0.58

0.9

63.4

35.6

Major PPT

70.9

0.47

62.5

43.4

Minor 5ss

34.4

-1.8

3.4

46.7

48.6

Minor BPS

61.8

0.35

1.6

64.81

41.3

Associated Gene:

Gene:

UPP1

Ensembl Gene ID:

ENSAPLG00000011706

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029290

84616760 - 84626854

10095

ENSAPLT00000012201

84617459 - 84627631

10173