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Intron Name: Anas_platyrhynchos_platyrhynchos_2_84625244_84626714_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

84625244 - 84626714

Intron Length:

1471

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCTAA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCATTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TGTCTTTTCATT

Flanking Amino Acid:

AAMCNLSGVRAAVVCVTLLN

Intron Amino Acid Position:

268

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.3

0.95

0.8

80.2

30.6

Major BPS

100

1.24

0.5

100

Major PPT

85.2

0.79

0.7

78.2

35.2

Minor 5ss

43.2

-0.8

2.9

55.3

48.9

Minor BPS

53.9

0.2

1.7

73.2

38.3

Associated Gene:

Gene:

UPP1

Ensembl Gene ID:

ENSAPLG00000011706

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029290

84616760 - 84626854

10095

ENSAPLT00000012201

84617459 - 84627631

10173