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Intron Name: Anas_platyrhynchos_platyrhynchos_2_84677037_84679589_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

84677037 - 84679589

Intron Length:

2553

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAGAT

5'SS Class:

strong_major

3'SS Sequence:

TACACTGTGATAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

TATACATACACT

Flanking Amino Acid:

ILDASISCSKVFYSAFVGAL

Intron Amino Acid Position:

1940

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

77.5

30.5

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

57.9

0.18

1.1

53.3

41.2

Minor 5ss

31.4

-2.1

3.5

46.6

48.7

Minor BPS

46.1

-0.2

2.3

71.25

Associated Gene:

Gene:

ABCA13

Ensembl Gene ID:

ENSAPLG00000022104

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041212

84634060 - 84826838

192779