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Intron Name: Anas_platyrhynchos_platyrhynchos_2_84682042_84687547_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

84682042 - 84687547

Intron Length:

5506

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTATGATTT

5'SS Class:

weak_major

3'SS Sequence:

CTGTTTGTTCTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTAAG

U12 Branch Point Sequence:

TCATCTGTATTT

Flanking Amino Acid:

GVLDTLQQVCFLQGGQFRSS

Intron Amino Acid Position:

2058

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.5

0.34

1.1

67.2

38.8

Major BPS

62.8

0.32

1.5

69.9

35.3

Major PPT

76.5

0.6

0.9

69.2

41.8

Minor 5ss

56.9

0.23

2.7

74.3

41.9

Minor BPS

47.6

-0.1

2.2

67.81

Associated Gene:

Gene:

ABCA13

Ensembl Gene ID:

ENSAPLG00000022104

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041212

84634060 - 84826838

192779