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Intron Name: Anas_platyrhynchos_platyrhynchos_2_84754828_84762891_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

84754828 - 84762891

Intron Length:

8064

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAT|GCAGAATCC

5'SS Class:

weak_major

3'SS Sequence:

TACCTCCTGGAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTATAAA

U12 Branch Point Sequence:

GTTATCTAAAAT

Flanking Amino Acid:

LKLTPRLYKNWLSTNAMSNY

Intron Amino Acid Position:

2954

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.1

0.19

1.3

56.3

Major BPS

78.6

0.71

78.6

Major PPT

58.2

0.19

1.1

60.2

35.4

Minor 5ss

29.3

-2.4

4.3

46.1

42.8

Minor BPS

54.9

0.23

1.8

74.52

41.9

Associated Gene:

Gene:

ABCA13

Ensembl Gene ID:

ENSAPLG00000022104

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041212

84634060 - 84826838

192779