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Intron Name: Anas_platyrhynchos_platyrhynchos_2_8522043_8527433_F

Intron Information:

Intron Rank:

126253

Intron Class:

major

Intron Phase:

Intron Coordinates:

8522043 - 8527433

Intron Length:

5391

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAGCTGC

5'SS Class:

strong_major

3'SS Sequence:

CTTCTATTCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAG

U12 Branch Point Sequence:

TGTTCTTCTATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

73.2

39.3

Major BPS

0.65

1.5

85.7

34.9

Major PPT

82.6

0.73

0.8

80.7

30.1

Minor 5ss

44.2

-0.6

2.9

59.3

45.5

Minor BPS

55.6

0.26

1.8

76.82

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017997

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048367

8522010 - 8528057

6048

ENSAPLT00000017802

8462780 - 8527846

65067