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Intron Name: Anas_platyrhynchos_platyrhynchos_2_85239124_85240422_F

Intron Information:

Intron Rank:

137880

Intron Class:

major

Intron Phase:

Intron Coordinates:

85239124 - 85240422

Intron Length:

1299

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

CTTCTGTCAGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCTAC

U12 Branch Point Sequence:

CTCTTTCTACTC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.5

0.9

72.2

42.2

Major BPS

63.9

0.35

1.3

64.5

42.5

Major PPT

70.1

0.45

0.9

66.7

34.2

Minor 5ss

19.4

-3.5

3.9

28.4

43.8

Minor BPS

44.8

-0.4

1.8

53.18

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024235

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042026

85214994 - 85241645

26652

ENSAPLT00000029384

85214177 - 85241645

27469