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Intron Name: Anas_platyrhynchos_platyrhynchos_2_85259149_85260229_R

Intron Information:

Intron Rank:

138620

Intron Class:

major

Intron Phase:

Intron Coordinates:

85259149 - 85260229

Intron Length:

1081

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

TATCTTTTACCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTGAA

U12 Branch Point Sequence:

TATCTTTTACCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

63.3

0.33

1.2

55.1

42.1

Major PPT

80.1

0.68

0.9

74.2

39.9

Minor 5ss

34.4

-1.8

3.4

46.7

48.6

Minor BPS

58.9

0.28

1.6

69.28

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022067

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028593

85258849 - 85261246

2398

ENSAPLT00000017271

85258849 - 85261246

2398