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Intron Name: Anas_platyrhynchos_platyrhynchos_2_85260284_85260821_R

Intron Information:

Intron Rank:

138621

Intron Class:

major

Intron Phase:

Intron Coordinates:

85260284 - 85260821

Intron Length:

538

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTACC

5'SS Class:

strong_major

3'SS Sequence:

ACTTTGCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTGAA

U12 Branch Point Sequence:

AGTGCGTAAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.8

80.6

31.8

Major BPS

65.8

0.39

57.3

39.4

Major PPT

81.1

0.7

0.9

77.4

36.3

Minor 5ss

37.1

-1.5

2.7

44.2

37.1

Minor BPS

47.7

-0

2.4

70.74

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022067

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017271

85258849 - 85261246

2398