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Intron Name: Anas_platyrhynchos_platyrhynchos_2_85270941_85317521_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

85270941 - 85317521

Intron Length:

46581

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TTCCTTTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

ACATAATAAACT

Flanking Amino Acid:

PDQCCPICKNGPNCFAETIV

Intron Amino Acid Position:

282

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.89

0.9

77.6

30.7

Major BPS

70.8

0.52

70.6

31.6

Major PPT

88.2

0.86

0.6

88.1

21.7

Minor 5ss

33.1

-1.9

3.2

40.3

40.2

Minor BPS

47.1

-0.1

2.1

65.6

44.3

Associated Gene:

Gene:

VWC2

Ensembl Gene ID:

ENSAPLG00000002792

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002827

85262646 - 85317912

55267