Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_85331321_85334089_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

85331321 - 85334089

Intron Length:

2769

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGTAG

5'SS Class:

major

3'SS Sequence:

TGTTTCAATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATTAT

U12 Branch Point Sequence:

TTTGTTTCAATT

Flanking Amino Acid:

ACDVSHRLNKAKYLIERFFK

Intron Amino Acid Position:

232

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.7

38.3

Major BPS

75.9

0.64

66.1

40.5

Major PPT

73.6

0.53

0.9

71.9

38.3

Minor 5ss

35.4

-1.7

3.3

45.9

49.3

Minor BPS

60.8

0.42

1.6

79.05

Associated Gene:

Gene:

ZPBP

Ensembl Gene ID:

ENSAPLG00000002807

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026945

85330355 - 85349956

19602

ENSAPLT00000002834

85325335 - 85349956

24622