Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_85344421_85348722_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

85344421 - 85348722

Intron Length:

4302

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTTTTC

5'SS Class:

major

3'SS Sequence:

AAACTTCTTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATAAA

U12 Branch Point Sequence:

TGATAATAAACT

Flanking Amino Acid:

LKIVGSIIFPVKVYVKLDHN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

75.3

35.6

Major BPS

70.8

0.52

70.6

31.6

Major PPT

74.5

0.55

0.9

70.4

40.1

Minor 5ss

43.8

-0.7

61.8

Minor BPS

49.1

0.01

2.1

72.33

43.6

Associated Gene:

Gene:

ZPBP

Ensembl Gene ID:

ENSAPLG00000002807

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026945

85330355 - 85349956

19602

ENSAPLT00000002834

85325335 - 85349956

24622