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Intron Name: Anas_platyrhynchos_platyrhynchos_2_85609666_85610091_R


Intron Information:

Intron Rank:
16

Intron Class:
major

Intron Phase:
3UTR

Intron Coordinates:
85609666 - 85610091

Intron Length:
426

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATT|GTAAGAGAA

5'SS Class:
major

3'SS Sequence:
AAAATTCATGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAA

U12 Branch Point Sequence:
TGGCTTTTAAAA

Flanking Amino Acid:
3UTR

Intron Amino Acid Position:
3UTR

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.6
0.51
1.1
66.1
32.9

Major BPS
90.4
1
0.7
90.2
19.3

Major PPT
63.4
0.3
1.1
56
43.7

Minor 5ss
32.3
-2
3.4
44.1
44.7

Minor BPS
56.7
0.21
1.4
62.33
37.6

Associated Gene:

Gene:
GRB10

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

85608666 - 85694050
85385

85608666 - 85716492
107827