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Intron Name: Anas_platyrhynchos_platyrhynchos_2_85626049_85628835_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

85626049 - 85628835

Intron Length:

2787

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTCTT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTGTCTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATATAT

U12 Branch Point Sequence:

GTGACTTCAACT

Flanking Amino Acid:

AKYEFFKNPMNFFPEQMVAW

Intron Amino Acid Position:

260

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.9

79.6

35.4

Major BPS

62.6

0.31

59.1

37.6

Major PPT

84.7

0.78

0.8

77.9

36.6

Minor 5ss

34.9

-1.7

3.1

47.1

42.6

Minor BPS

59.9

0.39

1.6

73.89

42.7

Associated Gene:

Gene:

GRB10

Ensembl Gene ID:

ENSAPLG00000004267

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019390

85610092 - 85671114

61023

ENSAPLT00000004425

85610007 - 85717127

107121

ENSAPLT00000037907

85608666 - 85694050

85385

ENSAPLT00000023835

85608666 - 85716492

107827