Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_85628952_85634721_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

85628952 - 85634721

Intron Length:

5770

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAGGGAAC

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTCCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

TCTTTCTCCACA

Flanking Amino Acid:

LVEHHPHLGLERCLEDHELI

Intron Amino Acid Position:

221

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.73

38.2

Major BPS

0.52

1.1

77.7

35.3

Major PPT

84.8

0.78

0.7

25.5

Minor 5ss

31.2

-2.2

3.4

41.6

45.4

Minor BPS

55.1

0.15

70.77

41.8

Associated Gene:

Gene:

GRB10

Ensembl Gene ID:

ENSAPLG00000004267

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037907

85608666 - 85694050

85385

ENSAPLT00000023835

85608666 - 85716492

107827

ENSAPLT00000019390

85610092 - 85671114

61023

ENSAPLT00000004425

85610007 - 85717127

107121