Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_85663360_85666174_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

85663360 - 85666174

Intron Length:

2815

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAACG

5'SS Class:

strong_major

3'SS Sequence:

TCTATGTTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

CTTTTCTTAATG

Flanking Amino Acid:

RSQPVRIMAVRRLQEEEQQF

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

41.8

Major BPS

0.92

0.9

86.2

29.1

Major PPT

78.2

0.63

0.9

37.2

Minor 5ss

32.4

-2

3.1

40.6

45.3

Minor BPS

76.3

0.69

1.3

74.4

38.6

Associated Gene:

Gene:

GRB10

Ensembl Gene ID:

ENSAPLG00000004267

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019390

85610092 - 85671114

61023

ENSAPLT00000004425

85610007 - 85717127

107121

ENSAPLT00000037907

85608666 - 85694050

85385

ENSAPLT00000023835

85608666 - 85716492

107827