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Intron Name: Anas_platyrhynchos_platyrhynchos_2_85829316_85834378_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

85829316 - 85834378

Intron Length:

5063

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTAC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTGTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

AATATCTTGAGT

Flanking Amino Acid:

SGAGAAKLKKVPLLV*

Intron Amino Acid Position:

1354

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.88

0.9

80.8

Major BPS

73.1

0.58

79.6

29.1

Major PPT

87.9

0.85

0.8

83.2

Minor 5ss

39.8

-1.1

2.9

45.2

Minor BPS

55.1

0.24

1.7

70.53

40.3

Associated Gene:

Gene:

COBL

Ensembl Gene ID:

ENSAPLG00000004666

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020276

85829298 - 85979551

150254

ENSAPLT00000004807

85829298 - 85979551

150254

ENSAPLT00000042977

85829298 - 85943421

114124

ENSAPLT00000038044

85829298 - 85943421

114124

ENSAPLT00000033289

85829298 - 85943421

114124