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Intron Name: Anas_platyrhynchos_platyrhynchos_2_85834634_85836772_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

85834634 - 85836772

Intron Length:

2139

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

GCATCATGAACAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

TTGGTATTAACT

Flanking Amino Acid:

GHSGTSKLKKISSLASEELQ

Intron Amino Acid Position:

1269

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.9

1.03

0.7

89.8

22.3

Major BPS

81.9

0.79

0.8

81.9

Major PPT

56.7

0.15

1.1

50.8

41.7

Minor 5ss

35.1

-1.7

3.1

48.5

47.2

Minor BPS

63.6

0.5

1.7

80.43

41.6

Associated Gene:

Gene:

COBL

Ensembl Gene ID:

ENSAPLG00000004666

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004807

85829298 - 85979551

150254

ENSAPLT00000042977

85829298 - 85943421

114124

ENSAPLT00000038044

85829298 - 85943421

114124

ENSAPLT00000033289

85829298 - 85943421

114124

ENSAPLT00000020276

85829298 - 85979551

150254