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Intron Name: Anas_platyrhynchos_platyrhynchos_2_85840932_85853127_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

85840932 - 85853127

Intron Length:

12196

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGATT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTTATTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAAAAAA

U12 Branch Point Sequence:

TTTCTCTTTATT

Flanking Amino Acid:

SNMGYDSASQSSKNEEITAA

Intron Amino Acid Position:

521

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

84.9

32.1

Major BPS

46.5

-0.2

49.3

29.7

Major PPT

80.4

0.68

0.8

81.8

28.5

Minor 5ss

37.6

-1.4

3.5

56.9

47.4

Minor BPS

67.4

0.63

1.6

85.04

35.1

Associated Gene:

Gene:

COBL

Ensembl Gene ID:

ENSAPLG00000004666

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033289

85829298 - 85943421

114124

ENSAPLT00000020276

85829298 - 85979551

150254

ENSAPLT00000004807

85829298 - 85979551

150254

ENSAPLT00000042977

85829298 - 85943421

114124

ENSAPLT00000038044

85829298 - 85943421

114124