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Intron Name: Anas_platyrhynchos_platyrhynchos_2_85853441_85879189_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

85853441 - 85879189

Intron Length:

25749

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGAGAT

5'SS Class:

major

3'SS Sequence:

GTATTTCATTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TTTCAGCTAACT

Flanking Amino Acid:

EVEDKRKSTMESLLPAHDNA

Intron Amino Acid Position:

417

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

71.2

34.6

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

72.7

0.51

0.9

71.1

39.8

Minor 5ss

26.2

-2.7

3.3

29.9

43.1

Minor BPS

48.2

-0

2.5

79.61

41.7

Associated Gene:

Gene:

COBL

Ensembl Gene ID:

ENSAPLG00000004666

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004807

85829298 - 85979551

150254