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Intron Name: Anas_platyrhynchos_platyrhynchos_2_85872285_85879189_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

85872285 - 85879189

Intron Length:

6905

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGAGAT

5'SS Class:

major

3'SS Sequence:

TTTCCCCCAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TTTCCCCCAACA

Flanking Amino Acid:

EVEDKRKSTMVYCCASFPSY

Intron Amino Acid Position:

417

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

71.2

34.6

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

75.5

0.57

0.8

70.6

28.9

Minor 5ss

26.2

-2.7

3.3

29.9

43.1

Minor BPS

60.7

0.33

1.9

78.63

37.1

Associated Gene:

Gene:

COBL

Ensembl Gene ID:

ENSAPLG00000004666

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020194

85872241 - 85979534

107294