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Intron Name: Anas_platyrhynchos_platyrhynchos_2_85876327_85879189_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

85876327 - 85879189

Intron Length:

2863

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGAGAT

5'SS Class:

major

3'SS Sequence:

ATCCCCCCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTGAT

U12 Branch Point Sequence:

TGACGCTGAAGT

Flanking Amino Acid:

EVEDKRKSTMGDGRQVPQKP

Intron Amino Acid Position:

417

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

71.2

34.6

Major BPS

70.8

0.52

1.2

63.4

44.3

Major PPT

69.6

0.44

0.8

27.5

Minor 5ss

26.2

-2.7

3.3

29.9

43.1

Minor BPS

45.7

-0.2

2.1

64.33

45.2

Associated Gene:

Gene:

COBL

Ensembl Gene ID:

ENSAPLG00000004666

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020276

85829298 - 85979551

150254

ENSAPLT00000042977

85829298 - 85943421

114124

ENSAPLT00000042812

85872241 - 85979534

107294

ENSAPLT00000038044

85829298 - 85943421

114124

ENSAPLT00000033289

85829298 - 85943421

114124