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Intron Name: Anas_platyrhynchos_platyrhynchos_2_85900520_85900956_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

85900520 - 85900956

Intron Length:

437

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTGAA

5'SS Class:

strong_major

3'SS Sequence:

TCCCTTTAAAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

TTCCCTTTAAAA

Flanking Amino Acid:

MSGQEKMAVQVQCSMTQSAE

Intron Amino Acid Position:

371

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

1.1

77.6

32.8

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

60.5

0.24

1.1

63.6

Minor 5ss

37.5

-1.4

3.2

47.2

Minor BPS

68.3

0.57

1.4

73.99

37.5

Associated Gene:

Gene:

COBL

Ensembl Gene ID:

ENSAPLG00000004666

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047580

85900274 - 85979534

79261