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Intron Name: Anas_platyrhynchos_platyrhynchos_2_85901152_85929298_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

85901152 - 85929298

Intron Length:

28147

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

AATCCATTTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTGATTTTAATC

Flanking Amino Acid:

FFKANRNNSKGFSTAPNSPS

Intron Amino Acid Position:

313

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.4

1.14

0.6

94.3

17.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

74.1

0.54

0.9

65.9

Minor 5ss

38.6

-1.3

3.4

57.8

46.8

Minor BPS

60.3

0.3

1.3

62.91

37.1

Associated Gene:

Gene:

COBL

Ensembl Gene ID:

ENSAPLG00000004666

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047824

85900717 - 85964688

63972

ENSAPLT00000042977

85829298 - 85943421

114124