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Intron Name: Anas_platyrhynchos_platyrhynchos_2_85929394_85931416_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

85929394 - 85931416

Intron Length:

2023

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACTGTAC

5'SS Class:

major

3'SS Sequence:

GTAATTGTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TCTATTGTAATT

Flanking Amino Acid:

TQSEPSLNYREPSRSVSLSS

Intron Amino Acid Position:

246

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.3

0.48

1.1

38.1

Major BPS

84.4

0.85

1.1

34.5

Major PPT

73.3

0.53

69.5

45.7

Minor 5ss

-1.6

3.4

49.9

46.7

Minor BPS

50.1

0.08

71.2

40.9

Associated Gene:

Gene:

COBL

Ensembl Gene ID:

ENSAPLG00000004666

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033289

85829298 - 85943421

114124

ENSAPLT00000047824

85900717 - 85964688

63972

ENSAPLT00000020276

85829298 - 85979551

150254

ENSAPLT00000047580

85900274 - 85979534

79261

ENSAPLT00000020194

85872241 - 85979534

107294

ENSAPLT00000042977