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Intron Name: Anas_platyrhynchos_platyrhynchos_2_85982628_85985881_F

Intron Information:

Intron Rank:

136472

Intron Class:

major

Intron Phase:

Intron Coordinates:

85982628 - 85985881

Intron Length:

3254

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTATTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TTATCTTTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

86.4

28.9

Major BPS

83.9

0.84

73.9

41.3

Major PPT

88.7

0.87

0.7

81.1

35.5

Minor 5ss

43.5

-0.7

2.9

62.1

37.1

Minor BPS

70.4

0.72

1.5

84.48

36.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023533

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043234

85982331 - 85993319

10989

ENSAPLT00000021872

85982331 - 85993639

11309