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Intron Name: Anas_platyrhynchos_platyrhynchos_2_85986818_85992667_F

Intron Information:

Intron Rank:

136475

Intron Class:

major

Intron Phase:

Intron Coordinates:

85986818 - 85992667

Intron Length:

5850

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCCTGGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTAAA

U12 Branch Point Sequence:

CACACATTAAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.83

70.9

39.9

Major BPS

70.2

0.5

71.6

30.1

Major PPT

83.8

0.76

0.9

81.4

30.6

Minor 5ss

33.5

-1.9

3.2

44.4

43.5

Minor BPS

-0.3

1.8

47.98

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023533

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038401

85986744 - 85992716

5973