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Intron Name: Anas_platyrhynchos_platyrhynchos_2_86227831_86228129_F

Intron Information:

Intron Rank:

129528

Intron Class:

major

Intron Phase:

Intron Coordinates:

86227831 - 86228129

Intron Length:

299

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGGT

5'SS Class:

strong_major

3'SS Sequence:

GTGATTTCTCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TGTTTGTGATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.9

35.3

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

63.7

0.31

1.1

60.7

44.9

Minor 5ss

32.2

-2

3.5

47.6

47.9

Minor BPS

45.4

-0.2

2.3

68.88

42.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019710

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028548

86227728 - 86232020

4293