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Intron Name: Anas_platyrhynchos_platyrhynchos_2_86280167_86280494_R

Intron Information:

Intron Rank:

139159

Intron Class:

major

Intron Phase:

Intron Coordinates:

86280167 - 86280494

Intron Length:

328

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATGAA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

TTTATGTAAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

27.6

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

92.9

0.96

0.6

92.3

18.2

Minor 5ss

31.4

-2.1

3.2

39.9

46.1

Minor BPS

49.1

-0

2.3

70.24

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022347

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018141

86279731 - 86284270

4540